Microbiome 360° · DNA shotgun sequencing · Made in Germany

At-home microbiome analysis with advanced DNA shotgun sequencing. Gut, oral and vaginal.

With Microbiome 360°, Bactera offers one of Europe's most advanced at-home microbiome analyses. We read the entire DNA of your sample and identify bacteria, viruses, fungi and parasites down to species level, for your gut, oral and vaginal microbiome, and for children from 0 to 17 years.

4.9(194 reviews)
Does this sound familiar?

Your body is sending signals. Most people just do not know how to read them.

Your gut, your mouth and your vaginal microbiome are three ecosystems, each with its own rules, and each one can quietly fall out of balance. Microbiome 360° shows you what yours really needs.

Gut

Ongoing gut problems even though you eat well, tiredness that sleep does not fix, or skin that never quite clears up?

Bloating · Fatigue · Skin
Oral

Bleeding gums, bad breath or cavities that keep coming back, even though you brush and floss?

Gums · Breath · Cavities
Vaginal

Itching, unusual discharge or infections that come back after every treatment?

Itching · Discharge · Infections
Kids gut

A child with a sensitive tummy, digestion that never settled after antibiotics, or problems that have been there since the first months?

Tummy · Antibiotics · Infancy
What if the real cause has never been identified?

Microbiome 360° reads the entire DNA of your sample and shows you what your gut, your mouth or your vaginal microbiome really needs, so you finally understand what your body is telling you.

Choose your analysis→
Choose your analysis

Three body sites for adults. And the gut for kids.

One product line, Microbiome 360°. Every analysis reads the entire DNA of your sample and comes with a detailed report: you see every organism we find, right down to the species, you get a personalised action plan, and you can download or share the report and your raw data at any time, with your doctor for example.

Science-led. Doctor-trusted.Highest scientific standards, the most advanced sequencing technology and our own analytic tools, made in Germany.
Made in GermanySequenced and analysed in Germany
Up to 1,000×more data depth than a typical 16S test
10,000+unique microorganisms
Species levelbacteria, viruses, fungi and parasites
The method

The entire DNA of your sample. Down to the species.

Not all microbiome tests work the same way: the technology behind the test decides how precise and how useful the result is. Most providers in Europe use 16S sequencing or culture methods, which mainly capture bacteria. Microbiome 360° uses shotgun metagenomics and reads all the DNA in your sample, so viruses, fungi, parasites, functional genes and resistance genes are picked up in the same analysis, on the most advanced sequencing technology available today and under the highest scientific standards.

Culture methodCultureother providers16S sequencing16Sother providersShotgun metagenomicsShotgunBactera
What is read Some bacteria and fungi A single marker gene ✓The entire DNA of the sample
Resolution A few bacteria Mostly genus level ✓Thousands of species
Viruses No No ✓Yes
Fungi Partly No ✓Yes
Parasites No No ✓Yes, including Giardia, Cryptosporidium and Entamoeba
Functional genes No No ✓Yes, genes for butyrate, nitrate, mucin production and more
Antimicrobial resistance Limited No ✓Yes, hundreds of genes screened
Sequencing depth per sample
Bactera shotgun metagenomicsUp to 25 millionPaired-end reads per sample. The DNA of every organism in the sample is read, at the depth used in international microbiome research.
around 1,000 times
Typical 16S testapprox. 10,000Reads per sample, limited to a single marker gene, usually with resolution down to genus level.

The comparison covers the sequencing depth per sample, that is the number of reads analysed. It refers to the analysis method and not to individual providers.

In simple terms: others look through a keyhole. Bactera opens the entire door.

1A dedicated workflow for every microbiomeSample type, extraction and sequencing depth are set separately for each body site: stool, saliva or vaginal swab.
2Our own bioinformatics pipelineEvery analysis is compared with reference cohorts built for that microbiome, and for children with a cohort for each age group.
3Our own evaluationScores, patterns and the action plan follow the ecology of the body site, not a generic template.
Why Bactera

Among the leading microbiome analysis providers in Europe.

Most microbiome tests only scratch the surface. With advanced DNA shotgun sequencing we reveal the full picture of your gut, oral or vaginal microbiome and turn complex biology into clear, usable insights. Bactera was founded in Cologne in 2025 by a team from microbiology, human medicine, bioinformatics and computer science. We apply the highest scientific standards to every analysis and keep investing in the most advanced technology and analytic tools, because our goal is world-class quality in everything we do.

Made in GermanyBactera was founded in Cologne, Germany, and is run from here. We do the analysis and evaluation ourselves, sequencing takes place at our partner laboratory in Germany, all within the German and European regulatory framework.
The most advanced technologyShotgun metagenomics with up to 25 million paired-end reads per sample, current sequencing chemistry and the latest analytic tools: the technology used in international microbiome research, applied to your sample.
Highest scientific standardsValidated, standardised methods from sample collection to report. Our bioinformatics pipelines and reference cohorts are built, reviewed and continuously improved by our own team, separately for every microbiome and, for children, for every age group.
Pseudonymised and GDPR compliantWe analyse samples pseudonymously and store your data securely under the GDPR. Human DNA is removed from the raw data before storage, and your data is never sold.
CologneHeadquarters, Germany
4 disciplinesMicrobiology, human medicine, bioinformatics, computer science
4 analysesOne product line, Microbiome 360°
Own pipelinesDeveloped and run in-house
How it works

Four steps to your report.

Everything happens at home and by post. Nothing to buy, nothing to pack and no appointment needed. Prepaid return included.

1

Order and register

Your kit arrives within 1 to 3 working days in Germany. Register it online at my.bactera.de with the code from the box.

2

Collect at home

Stool sample, saliva sample or vaginal swab, depending on the analysis. The illustrated instructions take you through it in a few minutes.

3

Send it back prepaid

The same box goes back to the laboratory with the prepaid return label. The stabilising solution keeps your sample stable in the post.

4

Read your report

After 4 to 6 weeks your report is ready in your Bactera account: interactive, downloadable and written so that you can take it to your doctor.

Research and collaboration

Advancing microbiome science, together with clinics and practices.

Our research

Our work rests on established microbiological methods, high-resolution sequencing and standardised bioinformatic procedures. We focus on two areas: microbiome analysis and restoration, and bacteriophage-based modulation of the microbial ecosystem.

  • Microbiome analysis and restoration
  • Bacteriophage-based modulation
  • Antimicrobial resistance
  • Infectious disease
Learn more about our research→

For practices, clinics and research groups

We provide shotgun metagenomic sequencing with bioinformatic analysis for clinical and scientific questions: gastroenterology, gynaecology, dentistry, cohort studies and longitudinal work. Our medical liaison team replies within 24 business hours.

  • Gastroenterology, gynaecology and dentistry
  • Universities and research institutes
  • Cohort studies and longitudinal work
  • Horizon Europe consortia
Collaborate with us→
Reviews

Trusted by customers looking for deeper insights.

People across Germany and Europe use Microbiome 360° to understand their microbiome at a depth that standard tests cannot reach. All reviews are collected through Reviews.io and come exclusively from verified purchases.

Frequently asked questions

Questions about microbiome analysis.

What is a microbiome analysis?

A microbiome analysis examines the microorganisms that live at one site of your body, using a sample you collect yourself: a stool sample for the gut, a saliva sample for the mouth and a vaginal swab for the vaginal microbiome. Bactera uses shotgun metagenomics, which reads the entire DNA of the sample and identifies bacteria, viruses, fungi and parasites at species level. The report compares your values with a healthy reference group and explains what they mean for you.

Which analysis is right for me?

Microbiome 360° Gut is the starting point for most adults and covers the largest and best studied microbiome. Microbiome 360° Oral and Microbiome 360° Vaginal are standalone analyses, each with its own ecology and its own reference values. For children and adolescents from newborn to 17 years there is Microbiome 360° Gut - Kids, with five age groups and their own reference cohorts.

Why is shotgun sequencing better than a 16S-based microbiome test?

Microbiome testing has become popular, but not all tests are the same. Many people assume that every analysis works in the same way; in reality the technology behind the test decides how accurate and how useful the result is. The two main approaches are 16S sequencing and shotgun metagenomic sequencing. Microbiome 360° uses shotgun sequencing for every body site because it gives a deeper, clinically meaningful picture: species-level data on bacteria, viruses, fungi and parasites, plus functional genes and resistance genes.

What is 16S sequencing?

16S sequencing looks at one small genetic barcode that all bacteria share. From this fragment the test estimates which groups of bacteria are present. It is a bit like hearing one sentence from a long conversation and trying to guess the whole story. The method can show general trends, such as whether diversity is high or low, but it usually stops at genus level and it only captures bacteria. In simple terms: 16S is looking through a keyhole, shotgun is opening the whole door.

What makes Bactera different from other providers?

The method and the range. Most providers in Europe use 16S sequencing or culture methods. We read the entire DNA of the sample with up to 25 million paired-end reads, identify organisms at species level, capture viruses, fungi and parasites in the same analysis and evaluate functional genes as well as resistance genes. And we cover the major microbiomes of the human body: gut, oral and vaginal for adults, plus the gut microbiome for children, each with its own workflow, its own pipeline and its own evaluation.

Can children take the test?

Yes. Microbiome 360° Gut - Kids is made for children and adolescents from newborn to 17 years, with five age groups and their own reference cohorts in our pipeline. Microbiome 360° Gut, Oral and Vaginal are for adults, 18 years and over.

Will I have to pay again when new analyses are added?

No. Whenever we add new markers, organisms or analyses, your existing sequencing data is re-analysed and your report is upgraded free of charge, without you sending in a new sample.

How accurate is this compared with other tests?

We offer one of the most advanced analyses on the market. Shotgun sequencing gives species-level data and detects bacteria, fungi, viruses, parasites and genes, at a sequencing depth of up to 25 million paired-end reads per sample, the depth used in international microbiome research.

What happens with my data?

Your sample is analysed in Germany and processed pseudonymously, and your data is stored securely under the GDPR. Human DNA is removed from the raw data, so we store only the DNA of the microorganisms. You can download your organism list, your FASTQ files and your abundance tables at any time, and your data is never sold.

How long does it take to get my results?

Usually 4 to 6 weeks after your sample reaches us. You are notified by email as soon as your report is ready in the portal.

Do I need to stop taking probiotics before the test?

For the gut analysis it is best to stop taking probiotics seven days before you collect the sample, and after a course of antibiotics to wait four weeks if you can. The instructions in your kit tell you exactly how to prepare for each analysis.

What does an analysis cost, and does health insurance pay for it?

Microbiome 360° Gut and Microbiome 360° Gut - Kids cost €229 each, Microbiome 360° Oral and Microbiome 360° Vaginal €329 each, including shipping and a prepaid return label. These are self-pay services. Statutory health insurers in Germany generally do not cover microbiome analyses; whether a private insurer contributes depends on your policy.

Did not find your answer? Contact us, we reply within 24 business hours.

Microbiome 360°

Discover your microbiomes.

Choose your analysis, collect your sample at home and read your report in 4 to 6 weeks. Prepaid return included.

Microbiome 360°Gut
4.95 (21) €229,00
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Microbiome 360°Oral
€329,00
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Microbiome 360°Vaginal
€329,00
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Microbiome 360°Gut Kids
€229,00
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