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Microbiome 360° Gut Analysis for Kids
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Microbiome 360°Gut Kids

Gut microbiome test for kids: gut flora analysis in five age stages

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Beyond a simple gut test. Your child’s entire microbiome decoded & analyzed.

With Microbiome 360° Gut Kids, Bactera offers one of the most advanced gut microbiome analyses for children available. Conventional tests read only single genes. We decode the entire DNA of one stool sample using shotgun sequencing and identify bacteria, fungi and clinically relevant organisms down to species level, compared with healthy children of the same developmental stage.

The sample is analyzed in-house in Germany, using advanced bioinformatics and the highest scientific standards. The result is a comprehensive view of your child’s microbiome: maturity for age, diversity, functional potential and other key areas of your child’s health.

One test. 360° analysis. Complete DNA. Deeper insights.

  • Microbiome maturity for your child’s own age stage
  • Diversity, dominance and ecosystem balance for age
  • Stage specific key microbes with context labels
  • Functional potential read from the genes themselves
  • Milk adaptation, Bifidobacterium ecology and HMO utilisation (infant)
  • Ecological transition and cross feeding network (toddler)
Choose the age stage first: it steers the whole analysis and switches the examples on this page.
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Product: Microbiome 360° Gut Kids

Scientific methodology at the highest level
Analysis in Germany with our own bioinformatics pipelines
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We drive the microbiome revolution in Europe
Microbiome 360°Gut Kids
€229,00
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Preview

Microbiome 360° Gut Kids is still in development

The analysis and the report are not in their final form yet and may still change until release. The following sections show how the report could look and which analyses we perform.

The difference

One stool sample, read against your child’s age

The gut community of a five month old baby looks nothing like that of a nine year old. That is why we compare every value with healthy children of the same age stage and report the analyses that matter at that stage.

AgeRead against the right reference

The same value means something different at 5 months and at 9 years. Every measure is compared with healthy children of the same developmental stage, in five age stages from 0 to 17 years.

SpeciesBacteria and fungi, resolved

Shotgun metagenomics identifies what is actually there, down to the species, including Bifidobacterium longum subsp. infantis and the yeasts of the fungal panel, in the same sequencing run.

GenesWhat the community can do

Milk sugar digestion, fibre fermentation, butyrate and the other capacities are read from the genes themselves, together with the organisms that carry them.

LifetimeYour raw data stays yours

FASTQ files and raw abundances remain available for download, and the stored sample can be reanalysed as your child grows and as the science advances.

Your report

What you get: a report that explains your child’s gut instead of just counting

For every value you see the comparison with healthy children of the same age stage, what it means and what to do next. Use the report interactively in the portal or download it.

  • Interactive in the portalDesktop and mobile, available at any time at my.bactera.de. You can download the report and share it, for example with your paediatrician.
  • Highest scientific standardVery deep analysis with 10 million paired-end reads per sample, read against age matched references. On request we increase the sequencing depth to 25 million reads: contact us before ordering via our contact page or info@bactera.de.
  • Raw data includedFASTQ files and abundance tables to download
At a glance, infant stageSample illustration from the report
Microbiome maturityDeveloping as expectedfor a 5-month-old, milk-oriented community
Milk adaptationStrongBifidobacterium-dominated, the healthy infant pattern
HMO utilizationComplete utilizerfully equipped to digest breast-milk sugars
Immune-tolerance ecologyWell representedtolerance-associated features present for age
Maturation for ageProgressing wellpost-weaning community developing on schedule
Butyrate-maker capacityEstablishedthe fibre-fermenting network has arrived and is solid
Fibre & carbohydrate breadthGood for agebroad enough now, with room to widen
Gatekeeper communityStrong colonization resistanceanaerobes established, gate-crashers kept low
Ecosystem balance for ageWell balanceda mature, fibre-oriented community for a 5-year-old
Fibre-fermentation engineStrong & broadequipped across many different plant fibres
SCFA output capacityHigh for agestrong butyrate, propionate and lactate recycling
Diet-pattern signaturePlant-diversea broad, plant-forward fibre signature
Ecosystem balance for ageBalanceda mature, adult-type community, leaning a little lower-fibre
Fibre fermentation & SCFAA little low for agebutyrate and fibre-fermentation capacity below the typical range
Resilience / redundancyModerateseveral taxa can cover key jobs, a workable safety margin
Diet responsivenessRoom to broaden fibrethe clearest, most actionable lever in your child's profile
Ecosystem balance for ageMature, adult-rangea well-developed community, sex-stratified reference
SCFA & fibre capacityStrongrobust butyrate and short-chain-fatty-acid machinery
Fibre-protein balanceProtein-leaning, add fibreproteolytic fermentation is a little ahead of fibre
Metabolic functional profileResilientbroad, redundant functions, a stable ecosystem

Every age stage opens with its own four headline findings. Switch the stage in the analyses below to see the other examples.

What is tested

What Microbiome 360° Gut Kids covers

Choose the age stage of your child and the analyses change with it: every stage has its own reference values, its own key microbes and its own report sections.

5Age stages from 0 to 17 years
10 millionPaired-end reads per sample
SpeciesBacteria and fungi, resolved
10 to 15Analyses per age stage
AgeMatched healthy reference group
ActionPersonalised plan for the stage
LifetimeAccess to the DNA bank
Step 1 · Choose your child’s age stage
Example report of a child aged 5 months
01 / 15

At a glance

The headline findings from your baby's stool, compared with healthy children of the same developmental stage. Overall picture: an age-appropriate, milk-adapted community with the key infant organism B. infantis present and a strong milk-digestion capacity.

Headline findingsSample illustration from the report
SignalYour baby's resultReading
Microbiome maturity4.9 moDeveloping as expected
Milk-Adaptation IndexP76Strong for age
HMO-utilization capacityP78High for age
Butyrate (fibre) capacityP8Normal before weaning
02 / 15

Microbiome maturity

How closely your baby's community matches the degree of development expected at 5 months, the flagship developmental measure. It matches healthy breastfed infants of about 5 months: a milk-oriented, low-diversity, Bifidobacterium-rich community is exactly what we expect now.

Developmental clockSample illustration from the report
SignalYour baby's resultReading
Maturity estimate4.9 moAs expected at 5 months
Community shape for agemilk-orientedLow diversity, Bifidobacterium-rich
03 / 15

Diversity & dominance for age

How varied and how concentrated your baby's community is, compared with healthy children of the same age. Low absolute diversity is normal and healthy at 5 months, and high single-genus dominance is the signature of a healthy milk-fed gut.

Diversity & dominanceSample illustration from the report
Diversity for age (Shannon)
LOWP54HIGH
2.15P54 · Typical for agemed 2.05
Bifidobacterium dominance
LOWP71HIGH
61 %P71 · Strong for agemed 52 %
04 / 15

Milk adaptation

Whether your baby's community has organised itself around breast milk, the defining feature of a healthy infant gut. It is strongly milk-adapted: Bifidobacterium-dominated, low in oxygen-tolerant pioneers, and carrying the milk-sugar machinery.

Milk-Adaptation IndexSample illustration from the report
Milk-Adaptation Index
LOWP76HIGH
P76Strong for age
Bifidobacterium dominance
LOWP71HIGH
61 %P71 · Strong for agemed 52 %
B. infantis and HMO genes
LOWP74HIGH
18.4 %P74 · Strongmed 9.0 %
05 / 15

Bifidobacterium ecology

The keystone genus of the infant gut, resolved to species, because each one means something different. Four species are present, and which ones are there tells a story about how well the milk-sugar machinery is established.

4 speciesSample illustration from the report
Bifidobacterium longum subsp. infantis
LOWP74HIGH
18.4 %P74 · Strongmed 9.0 %
Bifidobacterium longum subsp. longum
LOWP58HIGH
12.1 %P58 · Typical for agemed 10.5 %
Bifidobacterium breve
LOWP63HIGH
9.2 %P63 · Typical for agemed 7.5 %
Bifidobacterium bifidum
LOWP55HIGH
5.0 %P55 · Typical for agemed 4.6 %
06 / 15

HMO functional profile

What your baby's community is genetically equipped to do with the sugars in breast milk, the flagship infant function. Your baby carries the full set of milk-sugar genes, led by an efficient, competitive B. infantis strategy.

Milk-sugar capacitiesSample illustration from the report
HMO uptake & core digestion
LOWP82HIGH
P82High for age
Fucosylated-HMO digestion (2'-FL, 3-FL)
LOWP70HIGH
P70High for age
Sialylated-HMO digestion (3'-SL, 6'-SL)
LOWP64HIGH
P64Typical for age
Lacto-N-biose pathway
LOWP67HIGH
P67Typical for age
07 / 15

SCFA & cross-feeding

The short-chain fatty acids your baby's community is equipped to make, and how the microbes feed one another. A healthy milk-phase fermentation pattern: plenty of acetate and lactate from Bifidobacteria, with the fibre-and-butyrate machinery still ahead.

Fermentation capacitiesSample illustration from the report
Acetate production
LOWP73HIGH
P73Typical for age
Lactate production & cross-feeding
LOWP66HIGH
P66Typical for age
Butyrate (fibre) capacity
LOWP8HIGH
P8Very low, normal at 5 months
08 / 15

Early colonization ecology

How your baby's gut is progressing through the orderly hand-over from pioneer organisms to the anaerobes of a mature community. The pioneers are present and receding, which is exactly the healthy pattern.

Pioneers & early anaerobesSample illustration from the report
Anaerobic maturation
LOWP62HIGH
P62On track for age
Escherichia coli
LOWP55HIGH
3.4 %P55 · Typical for agemed 2.8 %
Enterococcus faecalis
LOWP52HIGH
0.7 %P52 · Typical for agemed 0.6 %
Bacteroides (fragilis / dorei)
LOWP44HIGH
4.1 %P44 · Typical for agemed 4.9 %
09 / 15

Immune-tolerance ecology

Microbial features that research associates with early immune education. Tolerance-associated features are well represented for your baby's age.

Tolerance-associated featuresSample illustration from the report
SignalYour baby's resultReading
Immune-development supportWell representedAbundant Bifidobacteria and high milk-sugar-digestion capacity
Immune-tolerance ecologyPresent for ageEarly lactate and acetate cross-feeding, on-track maturation
Allergy-associated patternPresent in the sampleFaecalibacterium, Veillonella, Rothia and Bifidobacteria, described as a pattern
10 / 15

Antibiotic impact

Whether your baby's community shows the signature of a recent antibiotic course. It shows the abundant Bifidobacteria, low oxygen-tolerant pioneers and low resistance-gene load we expect in a healthy, antibiotic-naive infant.

Antibiotic signatureSample illustration from the report
SignalYour baby's resultReading
Antibiotic-disruption signatureAbsentHealthy, antibiotic-naive pattern
BifidobacteriaAbundantThe expected infant picture
Resistance-gene loadLowNormal for an infant
11 / 15

Key microbes for this stage

The five organisms and capacities most meaningful for a 5-month-old. These change as children grow, so the highlights here are specific to this developmental stage.

5 highlightsSample illustration from the report
Bifidobacterium longum subsp. infantis
LOWP74HIGH
18.4 %P74 · Strongmed 9.0 %
HMO-utilization capacity
LOWP78HIGH
P78High for age
Bifidobacterium (breve / bifidum)
LOWP60HIGH
14.2 %P60 · Typical for agemed 12.0 %
Bacteroides (fragilis / dorei)
LOWP44HIGH
4.1 %P44 · Typical for agemed 4.9 %
Butyrate capacity
LOWP8HIGH
P8Very low, exactly right before weaning
12 / 15

Your child's microbial profile

The age-appropriate organisms in your baby's sample, grouped by their role. Milk-sugar Bifidobacteria are shown for infants; fibre and bile-acid organisms come later.

Your profile at a glanceSample illustration from the report
GroupShownReading
1 · HMO utilizers & Bifidobacteria4The engine of a healthy infant gut
2 · Early-life colonizers3The oxygen-tolerant pioneers that hand the gut over to the anaerobes
3 · Bacteroides generalists2Early anaerobes that help train the immune system
4 · Emerging anaerobes2The fibre-and-butyrate community of later childhood
5 · Opportunists (context)2Normal residents of an infant gut
6 · Fungi / yeasts1A tiny, normal part of the community
13 / 15

Screening, fungi & resistance genes

Detection-only checks, with reporting adjusted for age. Yeasts such as Candida live in many healthy children's guts, and resistance genes are naturally present in every baby's gut from birth.

Detection-only checksSample illustration from the report
CheckYour baby's resultReading
Microbial screeningClear for ageC. difficile is reported from age 2, since carriage is very common in healthy babies
Candida albicansDetectedDetected in about 60 % of healthy infants
Antibiotic-resistance genesNormal for ageCarried by ordinary gut bacteria, seeded from mother and environment
14 / 15

Development & nutrition insights

Biologically interesting interpretation of your baby's result. The milk-adapted community is developing beautifully, and the strong milk-sugar-digestion capacity supports energy and immune development from breast milk.

Insights for this stageSample illustration from the report
InsightYour baby's resultReading
Nutritional developmentDeveloping beautifullyStrong milk-sugar-digestion capacity supports energy and immune development
Digestive fermentation profileHealthy milk-phase patternPlenty of acetate and lactate from Bifidobacteria
Gut barrier & colonization resistanceEstablishing normallyBifidobacterial acidification and low oxygen-tolerant pioneers
15 / 15

Personalized action plan

Steps matched to your baby's age and result: supportive, everyday suggestions. For infants especially, follow your pediatrician's feeding guidance.

Steps for this stageSample illustration from the report
StepTypeReading
Keep going: continue breastfeeding as you and your pediatrician planMaintainBreast milk is what sustains B. infantis and HMO-digestion capacity
Introduce complementary foods on your pediatrician's scheduleWhen the time comesAround 4 to 6 months, first foods begin the shift toward a fibre-fermenting community
Your baby already carries the key infant organismsMaintainIncluding a genuine B. infantis; ask your pediatrician with any questions
01 / 14

At a glance

The headline findings from your child's stool, compared with healthy children of the same developmental stage. Overall picture: a healthy toddler mid-transition, where the milk-adapted community has handed over to a fibre-fermenting one, the butyrate network is established and on track, and colonization resistance is strong.

Headline findingsSample illustration from the report
SignalYour child's resultReading
Maturation for age2.6 yProgressing well, on schedule
Butyrate-maker capacityP57Established for age
Fibre & carbohydrate breadthP48Good for age, with room to widen
Gatekeeper communityP64Strong colonization resistance
02 / 14

Microbiome maturity

How closely your child's community matches the degree of development expected at 2.5 years, the flagship developmental measure. It matches healthy children of about 2.5 years, and the post-weaning shift toward a fibre-fermenting, more diverse community is well underway.

Developmental clockSample illustration from the report
SignalYour child's resultReading
Maturity estimate2.6 yDeveloping as expected at 2.5 years
Community shape for agefibre-fermentingRight on schedule for a 30-month-old
03 / 14

Diversity & dominance for age

How varied and how concentrated your child's community is, compared with healthy children of the same age. At 2.5 years, rising diversity and a falling Bifidobacterium share are the healthy pattern, as the milk-adapted ecosystem gives way to a fibre-fermenting one.

Diversity & dominanceSample illustration from the report
Diversity for age (Shannon)
LOWP58HIGH
3.05P58 · Rising for agemed 2.90
Bifidobacterium dominance
LOWP46HIGH
14 %P46 · Declining, expectedmed 16 %
04 / 14

Ecological transition

How your child's gut is progressing through the post-weaning hand-over from a milk-adapted community to a fibre-fermenting one. The infant milk-sugar specialists have receded, and adult-type anaerobes (butyrate-makers, starch specialists, acetogens) have moved in.

Post-weaning hand-overSample illustration from the report
Post-weaning maturation
LOWP60HIGH
P60On track for age
Butyrate production
LOWP57HIGH
P57Established for age
Resistant-starch capacity
LOWP53HIGH
P53Present for age
05 / 14

Key microbes for this stage

The five organisms and capacities most meaningful for a 2.5-year-old. These change as children grow, so the highlights here are specific to the post-weaning transition.

5 highlightsSample illustration from the report
Faecalibacterium prausnitzii
LOWP56HIGH
7.4 %P56 · Established for agemed 6.6 %
Agathobacter rectalis
LOWP54HIGH
5.1 %P54 · Established for agemed 4.7 %
Ruminococcus bromii
LOWP52HIGH
2.2 %P52 · Present for agemed 2.0 %
Anaerobutyricum hallii
LOWP50HIGH
1.9 %P50 · Typical for agemed 1.9 %
Bacteroides / Phocaeicola balance
LOWP49HIGH
P49Balanced for age
06 / 14

SCFA & cross-feeding network

The short-chain fatty acids your child's community is equipped to make, and how the microbes feed one another. For a toddler the story is butyrate now emerging: the fibre-fermenting network has arrived.

Fermentation capacitiesSample illustration from the report
Acetate production
LOWP61HIGH
P61Typical for age
Propionate production
LOWP56HIGH
P56Typical for age
Butyrate production
LOWP57HIGH
P57Established for age
Lactate utilization & cross-feeding
LOWP58HIGH
P58Typical for age
07 / 14

Fibre & starch utilization

What your child's community is genetically equipped to do with the fibres and starches in family food. Good for age and broad enough to support a healthy fermentation economy, with a little room to widen as the diet varies.

Fibre capacitiesSample illustration from the report
CAZyme breadth (plant-fibre enzymes)
LOWP48HIGH
P48Good for age
Resistant-starch capacity
LOWP53HIGH
P53Present for age
08 / 14

Colonization resistance

Whether your child's community is organised to resist gate-crashing organisms, the gatekeeper function. Three things line up: obligate anaerobes dominate the gut, Enterobacteriaceae are low, and emerging butyrate keeps the gut lining well-fed.

Gatekeeper communitySample illustration from the report
SignalYour child's resultReading
Colonization resistanceP64Strong for age
Obligate : facultative anaerobe ratioAnaerobes dominateThe established-community pattern
EnterobacteriaceaeLowGate-crashers kept low
Butyrate capacityP57Emerging butyrate keeps the environment unwelcoming to invaders
09 / 14

Immune development

Microbial features that research associates with immune education, described for your child's age. Features associated with a settled immune environment are present.

Immune-associated featuresSample illustration from the report
SignalYour child's resultReading
Immune-development supportPresent for ageAn established butyrate network, good colonization resistance and rising diversity
Allergy-associated patternPresent in the sampleFaecalibacterium, Roseburia and Bifidobacteria, described as a pattern
Immune-tolerance ecologyPresent for ageButyrate production, low-immunogenicity Bacteroides, on-track maturation
10 / 14

Antibiotic recovery

Whether your child's community shows the signature of a recent antibiotic course. It shows the established anaerobes, low Enterobacteriaceae and normal-for-age resistance-gene load we expect in a healthy toddler with no recent antibiotics.

Antibiotic signatureSample illustration from the report
SignalYour child's resultReading
Antibiotic-disruption signatureAbsentHealthy toddler pattern, with no sign of a recent course
Established anaerobesPresentThe expected toddler picture
Resistance-gene loadNormal for ageNormal for a toddler with no recent antibiotics
11 / 14

Your child's microbial profile

The age-appropriate organisms in your child's sample, grouped by their role. For a toddler that means the fibre-and-butyrate core, starch specialists, and the adult-type Bifidobacteria that replace the infant ones.

Your profile at a glanceSample illustration from the report
GroupShownReading
1 · Butyrate & fibre core5The fibre-fermenting, butyrate-making engine of the post-weaning gut
2 · Starch & glycan specialists4The organisms that unlock resistant starch and a broad range of plant and mucin sugars
3 · Bifidobacteria, adult transition3The adult-type B. adolescentis rises as the infant species recede
4 · Cross-feeding & acetogens3Acetogens, lactate hubs and propionate cross-feeders
5 · Opportunists (context)2Normal residents of a toddler gut, watched for persistence and load
6 · Fungi / yeasts1A tiny, normal part of the community, reported as presence only
12 / 14

Screening, fungi & resistance genes

Detection-only checks, with reporting adjusted for age. Yeasts such as Candida live in many healthy children's guts, and resistance genes are naturally present in every child's gut, carried by ordinary gut bacteria.

Detection-only checksSample illustration from the report
CheckYour child's resultReading
Microbial screeningClear for ageC. difficile is reported from age 2 and was not detected in the sample
Candida albicansDetectedDetected in many healthy toddlers
Saccharomyces cerevisiaeNot detectedReported as presence only
Antibiotic-resistance genesNormal for ageSeeded from family and environment, normal for a toddler
13 / 14

Development & nutrition insights

Biologically interesting interpretation of your child's result. The community has made the post-weaning shift to fibre and family food, with an established butyrate network and the resistant-starch keystone present.

Insights for this stageSample illustration from the report
InsightYour child's resultReading
Nutritional developmentPost-weaning shift madeA gut equipped to extract energy and metabolites from a varied plant diet
Digestive fermentation profileHealthy toddler patternA steady acetate base, present propionate, an established butyrate network and a working lactate food chain
Gut barrier & colonization resistanceStrong gatekeeper communityEstablished anaerobes, low Enterobacteriaceae and emerging butyrate
14 / 14

Personalized action plan

Steps matched to your child's age and result: supportive, everyday suggestions. Follow your pediatrician's guidance over anything here.

Steps for this stageSample illustration from the report
StepTypeReading
Broaden fibre variety, aim for a wide range of plant foodsMediumWhole grains, legumes, vegetables and fruit, plus cooked-and-cooled starches that feed R. bromii
Keep diversity climbing with family foodMaintainA broad, varied family diet keeps the new fibre-fermenting community expanding
Use antibiotics sensibly, when genuinely neededMaintainAvoiding unnecessary courses helps protect the butyrate network and colonization resistance
01 / 15

At a glance

The headline findings from your child's stool, compared with healthy children of the same developmental stage. Overall picture: a mature, well-balanced fibre-fermenting community with a strong, broad fibre engine, high SCFA capacity and a clear plant-diverse diet signature.

Headline findingsSample illustration from the report
SignalYour child's resultReading
Ecosystem balance for ageP71Well balanced for age
Fibre-fermentation breadthP74Strong & broad for age
SCFA output capacityP73High for age
Diet-pattern signatureP72Plant-diverse for age
02 / 15

Microbiome maturity

How closely your child's community matches the degree of development expected at 5 years, the flagship developmental measure. It matches healthy children of about 5 years: a fibre-oriented, adult-type community with an established butyrate core and broad glycan degraders.

Developmental clockSample illustration from the report
SignalYour child's resultReading
Maturity estimate~5.1 yDeveloping as expected
Community shape for agefibre-orientedAdult-type, with an established butyrate core
Position in the typical bandas expectedSquarely within the typical range for age
03 / 15

Diversity & ecosystem balance for age

How varied your child's community is and how well organised it is for a 5-year-old. Diversity is solid and still rising at 5 years, and the balance composite sits comfortably in the well-balanced range for age.

Diversity & balanceSample illustration from the report
Diversity for age (Shannon)
LOWP68HIGH
3.55P68 · Typical for agemed 3.30
Ecosystem Balance for Age
LOWP71HIGH
P71Well balanced for age
04 / 15

Key microbes for this stage

The organisms and capacities most meaningful for a 5-year-old. By preschool the keystones have shifted from the milk-loving Bifidobacteria of infancy to the fibre-fermenting, butyrate-making community of later childhood.

6 highlightsSample illustration from the report
Faecalibacterium prausnitzii (complex)
LOWP70HIGH
9.8 %P70 · Strong for agemed 8.0 %
Agathobacter rectalis
LOWP64HIGH
6.1 %P64 · Typical for agemed 5.4 %
Ruminococcus bromii
LOWP66HIGH
3.4 %P66 · Strong for agemed 2.6 %
Roseburia intestinalis
LOWP61HIGH
2.9 %P61 · Typical for agemed 2.4 %
Bacteroides thetaiotaomicron
LOWP57HIGH
4.2 %P57 · Typical for agemed 4.0 %
Akkermansia muciniphila
LOWP54HIGH
1.6 %P54 · Typical for agemed 1.4 %
05 / 15

Fibre-fermentation ecosystem

What your child's community is genetically equipped to do with dietary plant fibre, sub-substrate by sub-substrate. Different plant fibres need different enzymes and different microbes, and a mature gut can ferment a broad range of them.

Sub-substrate capacitiesSample illustration from the report
Fibre-fermentation breadth (CAZyme repertoire)
LOWP74HIGH
P74Strong & broad for age
Resistant starch
LOWP70HIGH
P70Strong for age
Arabinoxylan (wholegrain fibre)
LOWP66HIGH
P66Strong for age
β-glucan (oats, barley)
LOWP62HIGH
P62Typical for age
Pectin (fruit & vegetables)
LOWP63HIGH
P63Typical for age
Inulin / fructan (onion, chicory, wheat)
LOWP60HIGH
P60Typical for age
06 / 15

SCFA & cross-feeding network

The short-chain fatty acids your child's community is equipped to make, and how the microbes feed one another. Different SCFAs come from different organisms via different routes, so we report each capacity separately.

Fermentation capacitiesSample illustration from the report
Acetate production
LOWP70HIGH
P70High for age
Propionate production
LOWP64HIGH
P64Typical for age
Butyrate production
LOWP72HIGH
P72High for age
Lactate utilization & recycling
LOWP67HIGH
P67Healthy for age
07 / 15

Gut-barrier & mucin balance

Microbial features that support a healthy gut lining, read as balance. Your child's community is fibre-first, with Akkermansia muciniphila present at a healthy level and M. gnavus quietly low.

Barrier supportSample illustration from the report
Butyrate fuel for the gut lining
LOWP72HIGH
P72High for age
Mucin turnover balance
LOWP55HIGH
P55Balanced for age
Mediterraneibacter gnavus
LOWP32HIGH
0.4 %P32 · Low, favourable heremed 0.8 %
08 / 15

Bile-acid biology

What your child's community is equipped to do with bile acids: an early step well established, a later step just emerging. At 5 years the secondary-bile-acid capacity is typically just emerging and builds through later childhood.

Bile-acid stepsSample illustration from the report
Bile-salt hydrolase (BSH), first step
LOWP63HIGH
P63Present for age
Secondary-bile-acid genes (7α-dehydroxylation), later step
LOWP34HIGH
P34Just emerging, normal at 5 years
09 / 15

Vitamin & indole capacities

Two capacity reads for host-relevant molecules: indole signals made from dietary tryptophan, and how broadly your child's microbes carry the genes for a few informative B-vitamins. Microbial vitamin synthesis supplements dietary intake.

Community-coverage capacitiesSample illustration from the report
Tryptophan → indole / AhR-ligand capacity
LOWP65HIGH
P65Good for age
Folate (B9) biosynthesis coverage
LOWP68HIGH
P68Well covered for age
Cobalamin (B12) biosynthesis coverage
LOWP58HIGH
P58Covered for age
Biotin (B7) biosynthesis coverage
LOWP64HIGH
P64Well covered for age
10 / 15

Colonization resistance

How well equipped your child's community is to resist opportunists, a descriptive ecosystem property. Abundant fibre-fermenters use up the available resources, butyrate and acetate keep the colon lightly acidic, and pressure-associated organisms sit quietly at low levels.

Gatekeeper communitySample illustration from the report
SignalYour child's resultReading
Colonization resistance (composite)P73Strong for age, a well-defended community
Butyrate & SCFA outputP72High for age, a lightly acidified colon
Klebsiella pneumoniaeP44Typical for age, at a normal low level
Clostridioides difficileClearReported as detection-only from age 2
11 / 15

Dietary ecology

The dietary pattern your child's community reflects, described from microbial signals. Broad CAZyme breadth, a saccharolytic lean over proteolytic metabolism and healthy plant-fibre specialists point together to a varied, plant-forward diet.

Diet-Pattern SignatureSample illustration from the report
Diet-Pattern Signature, plant-diverse
LOWP72HIGH
P72Plant-diverse for age
CAZyme (fibre-enzyme) breadth
LOWP74HIGH
P74Strong & broad for age
12 / 15

Your child's microbial profile

The age-appropriate organisms in your child's sample, grouped by their role. By preschool the panel is the fibre-fermenting, glycan-degrading community of later childhood.

Your profile at a glanceSample illustration from the report
GroupShownReading
1 · Fibre-fermenting butyrate core5The engine of a school-age gut, making the preferred fuel of the colon lining
2 · Complex-carbohydrate specialists6Broad glycan degraders and resistant-starch keystones
3 · Mucus & barrier2Organisms that live at the mucus layer, read as balance
4 · Cross-feeding network3The metabolic connectors passing acetate, succinate and lactate around
5 · Bifidobacteria (adult-type)2Starch- and fibre-oriented, the Bifidobacteria of later childhood
6 · Opportunists (context)2Normal residents, watched for persistence and load
7 · Fungi / yeasts1A tiny, normal part of the community, reported as presence
13 / 15

Screening, fungi & resistance genes

Detection-only checks, with reporting adjusted for age. Yeasts such as Candida live in many healthy children's guts, and resistance genes are a natural part of every child's gut, carried by ordinary bacteria.

Detection-only checksSample illustration from the report
CheckYour child's resultReading
Microbial screeningClearC. difficile is reported as detection-only from age 2, and this sample is clear
Candida albicansDetectedDetected in many healthy children
Saccharomyces cerevisiaeDetectedA common diet and environment associated yeast, such as baker's or brewer's yeast
Antibiotic-resistance genesNormal for ageCarried by ordinary bacteria and picked up from food and the environment
14 / 15

Development & nutrition insights

Biologically interesting interpretation of your child's result. A mature, fibre-fermenting ecosystem with strong SCFA capacity: microbial support for energy harvest and gut health from a varied, plant-forward diet.

Insights for this stageSample illustration from the report
InsightYour child's resultReading
Nutritional developmentMature & fibre-fermentingStrong SCFA capacity supports energy harvest from a varied, plant-forward diet
Digestive fermentation profileStrong & broadResistant starch, arabinoxylan, β-glucan, pectin and fructan feed a well-connected cross-feeding network
Immune homeostasis (descriptive)Well represented for ageAbundant butyrate producers, good indole and AhR-ligand capacity, low pressure-associated organisms
15 / 15

Personalized action plan

Steps matched to your child's age and result: supportive, everyday suggestions. This profile is healthy, so the steps are maintenance-oriented.

Steps for this stageSample illustration from the report
StepTypeReading
Keep the plant-diverse diet goingMaintainA variety of vegetables, fruit, wholegrains and legumes across the week
Keep fibre variety broadMaintainRotate resistant starch, wholegrains, oats and barley, fruit and vegetables, onion, garlic and chicory
Use antibiotics only when your pediatrician advisesSensible useA mature fibre-fermenting community like this one typically recovers well
01 / 15

At a glance

The headline findings from your child's stool, compared with healthy children of the same developmental stage. Overall picture: a balanced, adult-type community that is developing on schedule, with one clear and workable theme, a lower-fibre pattern that gently pulls down butyrate and nudges up mucin-reliance.

Headline findingsSample illustration from the report
SignalYour child's resultReading
Ecosystem balance for ageP56Balanced for age
Butyrate & fibre fermentationP28A little low for age, the most actionable finding
Resilience / redundancyP46Moderate for age, a workable backup margin
Mucin-relianceP71Slightly elevated, eases as fibre variety grows
02 / 15

Microbiome maturity

How closely your child's community matches the degree of development expected at 9 years, the flagship developmental measure. It matches the mature, adult-type community expected of a healthy school-age child, with fibre-fermenting and bile-acid organisms established.

Developmental clockSample illustration from the report
SignalYour child's resultReading
Maturity for ageWithin rangeWithin typical range for age
Community shapeAdult-typeThe milk-oriented infant pattern is long behind
How it is read at school ageA band, not a yearFrom about 6 years maturity is reported as a typical range
03 / 15

Diversity & ecosystem balance for age

How varied your child's community is and how it is organised, compared with healthy children of the same age. Diversity is solid for a 9-year-old, and the community is broadly balanced and adult-type with a mild tilt toward a lower-fibre configuration.

Diversity & balanceSample illustration from the report
Diversity for age (Shannon)
LOWP58HIGH
3.35P58 · Typical for agemed 3.30
Ecosystem balance for age
LOWP56HIGH
P56Balanced for age
Fibre-fermenter representation
LOWP34HIGH
P34A little low
Carbohydrate-specialist breadth
LOWP48HIGH
P48Typical
Barrier / mucus organisms
LOWP64HIGH
P64Slightly high
04 / 15

Ecosystem resilience & functional redundancy

Whether your child's community has enough overlap, independent organisms covering the same key jobs, to absorb a knock and bounce back. There is a moderate number of backups: enough for a workable safety margin, with room to widen it by broadening fibre.

Redundancy signalsSample illustration from the report
Functional redundancy (resilience)
LOWP46HIGH
P46Moderate for age
Butyrate-producer redundancy
LOWP38HIGH
P38A little thin
Carbohydrate-degradation redundancy
LOWP52HIGH
P52Moderate
05 / 15

Key microbes for this stage

The five organisms and capacities most meaningful for a 9-year-old. At school age the spotlight is on the fibre-fermenting, butyrate-making community and the balance between fibre and mucus.

5 highlightsSample illustration from the report
Faecalibacterium prausnitzii
LOWP27HIGH
3.1 %P27 · Low for agemed 6.5 %
Roseburia / Agathobacter
LOWP30HIGH
1.6 %P30 · Low for agemed 3.4 %
Ruminococcus bromii
LOWP31HIGH
0.9 %P31 · Low for agemed 2.2 %
Akkermansia muciniphila
LOWP71HIGH
2.4 %P71 · Slightly highmed 1.3 %
Bacteroides / Segatella balance
LOWP38HIGH
P38Bacteroides-leaning
06 / 15

Fibre fermentation & resistant starch

What your child's community is genetically equipped to do with dietary fibre, the flagship school-age function. The fibre toolkit is a little narrow for age, consistent with a smaller range of plant fibres reaching the gut.

Fibre capacitiesSample illustration from the report
CAZyme breadth (fibre-digesting enzymes)
LOWP33HIGH
P33Narrow for age
Resistant-starch capacity
LOWP29HIGH
P29Low for age
Arabinoxylan / whole-grain fibre capacity
LOWP36HIGH
P36A little low
07 / 15

SCFA network

The short-chain fatty acids your child's community is equipped to make, read as one connected food web. Acetate, propionate and lactate handling are all typical, and butyrate is the low link, the actionable lever in this profile.

Fermentation capacitiesSample illustration from the report
Acetate capacity
LOWP57HIGH
P57Typical for age
Propionate capacity
LOWP52HIGH
P52Typical for age
Butyrate capacity
LOWP28HIGH
P28Low for age
Lactate balance & cross-feeding
LOWP49HIGH
P49Typical for age
08 / 15

Mucin / fibre-mucus and protein balance

Whether your child's community is leaning on dietary fibre or on the gut's mucus layer for fuel, and how much protein it ferments. Both are sensitive read-outs of fibre intake, and both move in the healthy direction as the variety of plant fibres increases.

Balance signalsSample illustration from the report
Mucin-reliance pattern
LOWP71HIGH
P71Slightly elevated
Proteolytic vs saccharolytic balance
LOWP61HIGH
P61Leaning slightly proteolytic
09 / 15

Bile-acid metabolism

Whether your child's community has matured into the bile-acid chemistry of an older child, an adult-transition milestone. Secondary-bile-acid genes are now present, a normal maturation milestone that also supports colonization resistance.

Bile-acid capacitiesSample illustration from the report
Bile-salt hydrolase (BSH) capacity
LOWP55HIGH
P55Typical for age
Secondary-bile-acid gene capacity (7α-dehydroxylation)
LOWP44HIGH
P44Present, maturing
10 / 15

Tryptophan, indole & microbial vitamins

The signalling molecules and B-vitamins your child's community carries genes for. Indole-family capacity and the microbial folate, B12 and biotin capacities are all typical for age.

Genetic capacitiesSample illustration from the report
Tryptophan to indole capacity
LOWP50HIGH
P50Typical for age
Folate (B9) synthesis capacity
LOWP56HIGH
P56Typical for age
Vitamin B12 (cobalamin) capacity
LOWP49HIGH
P49Typical for age
Biotin (B7) & other B-vitamin capacity
LOWP53HIGH
P53Typical for age
11 / 15

Gas ecology: methane & sulfur

How your child's community handles the gases of fermentation, including a maturation marker that appears at school age. The archaeal methanogen Methanobrevibacter smithii is newly detected, and hydrogen-sulfide potential is modest for age.

Gas ecologySample illustration from the report
SignalYour child's resultReading
Methane: Methanobrevibacter smithiiNewly detectedA normal maturation marker, prevalence climbs through childhood
Hydrogen-sulfide potentialP42Modest for age, a diet-linked read-out, framed neutrally
Gas ecology overallMaturingMethanogens and sulfur organisms shape how the gut handles hydrogen
12 / 15

Your child's microbial profile

The age-appropriate organisms in your child's sample, grouped by their role. At school age the meaningful players are the fibre-fermenting butyrate community, the carbohydrate specialists and the maturing adult-transition organisms.

Your profile at a glanceSample illustration from the report
GroupShownReading
1 · Butyrate & SCFA producers4The fibre-fermenting engine of a school-age gut, the central thread of this report
2 · Complex-carbohydrate specialists4Glycan generalists and starch specialists, well represented
3 · Mucus & barrier1Favourable in balance, leaning on the mucus layer when fibre is scarce
4 · Adult-transition specialists2Bile-acid chemistry and the archaeal methanogen, appearing on schedule
5 · Bifidobacteria2Adult-type starch and fructan fermenters, well established for age
6 · Opportunists (context)2Normal low-level residents, watched for persistence and load
7 · Fungi / yeasts1A tiny, normal part of the community, reported as presence only
13 / 15

Colonization resistance, screening & fungi

Whether your child's community is organised to keep opportunists in check, together with the detection-only checks, adjusted for age. The gatekeeper community is adequate for age and provides sound colonization resistance.

Gatekeepers & detection-only checksSample illustration from the report
CheckYour child's resultReading
Gatekeeper communityAdequate for ageA diverse anaerobic community, SCFA acidification and maturing bile-acid chemistry
Pathobiont pressureNormal, low for ageEnterobacteriaceae sit at a normal, low level, a surveillance read-out
Microbial screeningClear for ageC. difficile is reported detection-only at this age and was clear in this sample
Candida albicansDetectedDetected in about 30 % of healthy school-age children
Antibiotic-resistance genesNormal for ageCarried by ordinary bacteria, seeded from food and environment
14 / 15

Development & nutrition insights

Biologically interesting interpretation of your child's result. The community is mature and adult-type, developing on schedule, and the one clear theme, a lower-fibre pattern, is genuinely actionable.

Insights for this stageSample illustration from the report
InsightYour child's resultReading
Nutritional developmentMature, adult-typeBroadening the range of plant fibres feeds the butyrate-making organisms directly
Digestive fermentation profileLower-fibre signatureAcetate, propionate and lactate typical, butyrate low, mucin-reliance slightly up
Digestive & gas noteMaturation markerThe newly detected methanogen M. smithii is reported neutrally
15 / 15

Personalized action plan

Steps matched to your child's age and result: supportive, everyday suggestions. Each one is tied to the driver in the profile it addresses.

Steps for this stageSample illustration from the report
StepTypeReading
Broaden the range of plant fibres, whole grains and resistant-starch foodsHighCooled cooked potato and rice, legumes and slightly-green bananas feed R. bromii; whole grains, vegetables and fruit feed F. prausnitzii, Roseburia and Agathobacter
Diversify the plants across the week, aim for variety rather than perfectionMediumA wider range of plant foods widens the fibre toolkit and thickens the butyrate bench
Keep antibiotics for when they are genuinely neededMaintainProtects the fibre-fermenting community and the resilience margin; always follow your pediatrician's advice
01 / 15

At a glance

The headline findings from your child's stool, compared with healthy adolescents of the same age and sex. Overall picture: a mature, adult-range community with strong fibre-fermentation and SCFA capacity, and one clear, actionable theme, pairing a higher-protein diet with generous fibre.

Headline findingsSample illustration from the report
SignalYour child's resultReading
Ecosystem balance for ageP66Mature, adult-range
Butyrate productionP74Strong for age
Fibre ÷ protein balanceP42Protein-leaning, add fibre
Functional redundancyP73Resilient
02 / 15

Microbiome maturity

How closely your child's community matches the degree of development expected by mid-adolescence, the flagship developmental measure, read as a range at this age. It sits within the adult-typical range: the fibre, SCFA, bile-acid and methane suites are all established.

Developmental rangeSample illustration from the report
SignalYour child's resultReading
Maturity for ageAdult-rangeWithin the adult-typical range expected by mid-adolescence
Community shape for ageMatureCompared with healthy adolescents of the same sex, the community reads as mature
Suites establishedFibre, SCFA, bile acids, methaneFrom about age 6, maturity is read as a range rather than a moving clock
03 / 15

Diversity & ecosystem balance

How varied your child's community is compared with healthy adolescents of the same age and sex, and how well it absorbs everyday disturbances. A solid, mature diversity with a broad species roster, in a balanced, adult-range ecosystem.

Ecology for ageSample illustration from the report
Diversity for age (Shannon)
LOWP68HIGH
3.95P68 · Typical for agemed 3.80
Richness (species observed)
LOWP64HIGH
184P64 · Typical for agemed 176
Ecosystem balance (composite)
LOWP66HIGH
P66Mature, adult-range
Functional redundancy & resilience
LOWP73HIGH
P73Resilient
04 / 15

Key microbes for this stage

The five organisms most meaningful for an adolescent. By this age the highlights are the fibre-and-butyrate keystones, the glycan generalists and the later-maturation markers, a very different set from the milk organisms of infancy.

5 highlightsSample illustration from the report
Faecalibacterium prausnitzii complex
LOWP71HIGH
9.8 %P71 · Strong for agemed 7.5 %
Roseburia / Anaerostipes (butyrate guild)
LOWP66HIGH
6.4 %P66 · Typical for agemed 5.6 %
Bacteroides / Phocaeicola generalists
LOWP58HIGH
18.2 %P58 · Typical for agemed 17.0 %
Akkermansia muciniphila
LOWP54HIGH
1.6 %P54 · Typical for agemed 1.4 %
Bifidobacterium adolescentis
LOWP62HIGH
3.1 %P62 · Typical for agemed 2.6 %
05 / 15

SCFA network

The short-chain fatty acids your child's community is equipped to make, and how the microbes feed one another. A mature, well-connected network: strong acetate and butyrate, steady propionate, and lactate that is made and consumed.

Fermentation capacitiesSample illustration from the report
Acetate production
LOWP70HIGH
P70Strong for age
Propionate production
LOWP65HIGH
P65Typical for age
Butyrate production
LOWP74HIGH
P74Strong for age
Lactate production & cross-feeding
LOWP60HIGH
P60Typical for age
06 / 15

Fibre fermentation

What your child's community is genetically equipped to do with dietary fibre, the fuel behind the SCFA engine. The machinery is good and broad, and the most useful thing for this result is simply to keep the engine well fed.

Fibre capacitiesSample illustration from the report
Fibre-degrading enzyme breadth (CAZymes)
LOWP69HIGH
P69Good for age
Resistant-starch fermentation
LOWP64HIGH
P64Good for age
Butyrate production (the engine it feeds)
LOWP74HIGH
P74Strong for age
07 / 15

Protein fermentation

What your child's community is equipped to do with protein that reaches the colon, read as balance and framed in context. Proteolytic capacity is a little elevated, consistent with a higher-protein, athletic diet.

Protein capacitiesSample illustration from the report
Proteolytic (protein-fermenting) capacity
LOWP72HIGH
P72Elevated, diet-linked
Branched-chain fatty acids (BCFA)
LOWP66HIGH
P66Slightly elevated
08 / 15

Fibre-protein balance

The flagship adolescent readout: where the fermentation balance sits, and the one change that moves it most. Your child's community is capable on both sides, and the balance currently leans protein, an expected pattern on a higher-protein athletic diet and a very fixable one.

The balance and its two sidesSample illustration from the report
Fibre ÷ protein fermentation balance
LOWP42HIGH
P42Protein-leaning, add fibre
Saccharolytic side: CAZyme breadth
LOWP69HIGH
P69Good for age
Proteolytic side: protein fermentation
LOWP72HIGH
P72Elevated, diet-linked
09 / 15

Bile-acid metabolism

Your child's capacity to transform bile acids, a late-maturing suite that reaches adult range by adolescence. Both steps are present and mature, a normal marker of this developmental stage that supports colonization resistance.

Bile-acid capacitiesSample illustration from the report
Bile-salt hydrolase (BSH) capacity
LOWP63HIGH
P63Mature for age
Secondary-bile-acid production
LOWP58HIGH
P58Mature for age
Clostridium scindens
LOWP56HIGH
0.6 %P56 · Typical for agemed 0.5 %
10 / 15

Tryptophan, indole & sulfur

Two diet-linked capacities: making indole signals from dietary tryptophan, and generating hydrogen sulfide from sulfur-containing amino acids and dietary sulfate. Indole capacity is typical for age, and sulfide potential is moderate, in keeping with a higher-protein omnivorous diet.

Signal & sulfur capacitiesSample illustration from the report
Tryptophan to indole capacity
LOWP61HIGH
P61Typical for age
Hydrogen-sulfide (H₂S) potential
LOWP55HIGH
P55Moderate, diet-linked
Bilophila wadsworthia
LOWP70HIGH
0.9 %P70 · Higher end, diet-linkedmed 0.6 %
11 / 15

Methane production

Whether your child carries the methane-producing archaeon, a normal, neutral feature by adolescence. Methanobrevibacter smithii is present in the sample, and its prevalence rises through childhood, so detection is usual by the teens.

Methanogen detectedSample illustration from the report
SignalYour child's resultReading
Methanobrevibacter smithiiDetectedUsual by adolescence, often the majority of teenagers carry it
Methanogenesis capacityP57Present, normal for age
Why we report itNeutral, informativeMethane can influence gas and stool patterns, so it is relevant to everyday digestion
12 / 15

Metabolic ecology & nutrition insights

A descriptive read of how your child's community processes an omnivorous, athletic diet. A coherent, healthy adolescent pattern: a strong fibre-and-SCFA engine, a mildly protein-leaning balance, moderate sulfur potential and a normal methanogen.

Insights for this stageSample illustration from the report
InsightYour child's resultReading
Fermentation ecologyCoherent omnivorous patternStrong fibre-and-SCFA engine with a mildly protein-leaning balance
Nutritional & functional capacitySolid and strongA solid fibre-fermentation toolkit and a strong SCFA engine, the functional signs of a varied, plant-inclusive diet
Digestive functionOrdinary teenage featuresM. smithii present and normal by adolescence, with moderate, diet-linked sulfur potential
13 / 15

Your child's microbial profile

The age-appropriate organisms in your child's sample, grouped by their role. For an adolescent the meaningful cast is the fibre-and-butyrate guild, the glycan generalists, the later-maturation specialists and the mucus and cross-feeding organisms.

Your profile at a glanceSample illustration from the report
GroupShownReading
1 · Butyrate & SCFA producers5The engine of a mature gut: fibre fermenters and lactate users
2 · Bacteroides / Segatella generalists4Broad glycan degraders and a stable backbone of the adult-type community
3 · Later-maturation & specialists4The adult-type Bifidobacterium, the bile-acid and methane specialists
4 · Mucus & cross-feeding3Organisms at the mucus interface that knit the fermentation network together
5 · Opportunists (context)2Normal low-level residents, reported for context
6 · Fungi / yeasts2A tiny, normal part of the community
14 / 15

Screening, fungi & resistance genes

Detection-only checks, with reporting adjusted for age. Yeasts such as Candida live in many healthy children's guts, and resistance genes are a natural part of every gut community, carried by ordinary bacteria.

Detection-only checksSample illustration from the report
CheckYour child's resultReading
Microbial screeningClear for ageC. difficile is reported detection-only in adolescents, and the screening was clear
Saccharomyces cerevisiaeDetectedUsually dietary, from breads and fermented foods
Antibiotic-resistance genesNormal adult rangeCarried by ordinary gut bacteria, and within the normal adult range for an adolescent
15 / 15

Personalized action plan

Steps matched to your child's age and result: supportive, everyday suggestions. The headline is simple: keep the protein, add the fibre.

Steps for this stageSample illustration from the report
StepTypeReading
Pair your child's protein with generous fibreBalanceWhole grains, legumes (beans, lentils, chickpeas) and plenty of vegetables and fruit feed the fibre side of the balance directly
Keep diversity high with a wide-ranging, minimally-processed dietMaintainVariety keeps the fibre-fermenting and butyrate-making guilds well fed and the ecosystem redundant and stable
Use antibiotics sensibly, when genuinely neededMaintainA resilient adolescent community recovers well from everyday disturbances; use them when a clinician indicates them
Host-relevant biology

What the community means for your child at this stage

Here we show what the community means for your child right now: immune development, colonisation resistance, the gut barrier and everyday nutrition signals, each with the signals behind it and matched to the selected age stage.

Immune development

Well represented
  • Abundant Bifidobacteria
  • High milk-sugar-digestion capacity (P78)
  • Genetic capacity for indole-3-lactic acid via B. infantis

Immune-tolerance ecology

Present for age
  • Early lactate and acetate cross-feeding
  • On-track anaerobic maturation (P62)
  • Low-immunogenicity Bacteroides (P44)

Antibiotic impact

Antibiotic-naive pattern
  • Abundant Bifidobacteria
  • Low oxygen-tolerant pioneers
  • Low resistance-gene load, normal for an infant

Gut barrier & colonization resistance

Establishing normally
  • Bifidobacterial acidification
  • Low oxygen-tolerant pioneers
  • Healthy milk-phase acetate and lactate

Immune development

Present for age
  • An established butyrate network (P57)
  • Good colonization resistance (P64)
  • Rising diversity for age (P58)

Colonization resistance

Strong for age
  • Obligate anaerobes dominate the gut
  • Enterobacteriaceae are low
  • Emerging butyrate keeps the gut lining well-fed

Antibiotic recovery

No disruption signature
  • Established anaerobes
  • Low Enterobacteriaceae
  • Normal-for-age resistance-gene load

Digestive fermentation profile

Healthy toddler pattern
  • A steady acetate base (P61)
  • Present propionate (P56)
  • A working lactate cross-feeding food chain (P58)

Gut barrier & mucin balance

Balanced for age
  • Butyrate fuel for the gut lining (P72)
  • Mucin turnover balance (P55)
  • Akkermansia balanced, M. gnavus low (P32)

Tryptophan & indole metabolism

Good for age
  • Tryptophan to indole and AhR-ligand capacity (P65)
  • Tryptophanase and aromatic amino-acid pathways
  • Indole-3-lactic acid capacity still somewhat elevated, a normal transitional feature

Colonization resistance

Strong for age
  • Composite colonization resistance (P73)
  • Dense fibre-fermenting core and strong SCFA output
  • Pressure-associated organisms quietly low, Klebsiella at P44

Dietary ecology

Plant-diverse for age
  • Diet-Pattern Signature (P72)
  • Broad CAZyme breadth (P74)
  • Saccharolytic lean over proteolytic metabolism

Tryptophan & indole metabolism

Typical for age
  • Tryptophan to indole capacity (P50)
  • Tryptophanase (tnaA) and indole-lactate pathways
  • Carried by a diverse set of taxa

Gas ecology: methane & sulfur

Maturing on schedule
  • Methanobrevibacter smithii newly detected
  • Hydrogen-sulfide potential modest for age (P42)
  • Prevalence of methanogens climbs through childhood

Colonization resistance

Sound for age
  • A diverse anaerobic gatekeeper community
  • SCFA acidification of the gut
  • Maturing secondary-bile-acid chemistry (P44)

Development & nutrition

Mature, adult-type
  • Developing on schedule for 9 years
  • A lower-fibre pattern, the actionable theme
  • Butyrate and mucin-reliance both respond to broader plant fibre

Fermentation ecology

Coherent omnivorous pattern
  • Strong fibre-and-SCFA engine (P74 butyrate)
  • Mildly protein-leaning balance (P42)
  • Moderate sulfur potential and a normal methanogen

Nutritional & functional capacity

Solid and strong
  • Solid fibre-fermentation toolkit (P69)
  • Strong SCFA engine, the sign of a varied, plant-inclusive diet
  • Protein fermentation mildly elevated (P72)

Digestive function

Ordinary teenage features
  • M. smithii present, normal by adolescence
  • Methane relevant to gas and stool patterns, neutral
  • Sulfur potential moderate and diet-linked (P55)

Gut barrier & colonization resistance

Mature capacity
  • Bile-salt hydrolase capacity mature for age (P63)
  • Secondary-bile-acid capacity present and mature (P58)
  • Tryptophan to indole capacity typical for age (P61)
Functional potential

What your child’s gut community is genetically equipped to do

Here the question shifts from which bacteria are present to what they can do. Every panel estimates a capacity from the genes we detect and names the organisms behind it. The panels change with the age stage, because the community’s tasks change as your child grows.

LOWP82HIGH

Breast milk is full of special sugars, the human-milk oligosaccharides (HMOs). This panel shows which parts of the milk-sugar machinery your baby's community carries.

Complete milk-sugar transport and core enzymes, driven by B. infantis. Your baby's community is a complete HMO utilizer.

Built from
Genes & organisms behind this score
Blon_2331 to 2361 cluster
GH20 / GH42
B. infantis
LOWP70HIGH

Enzymes for the fucose-decorated sugars that dominate most mothers' milk.

High for age, part of the full set of milk-sugar genes your baby carries.

Built from
Genes & organisms behind this score
GH29 α-fucosidases
GH95 α-fucosidases
LOWP64HIGH

Enzymes for the sialic-acid-decorated sugars linked to brain and gut development.

Typical for age, alongside the efficient shared Lacto-N-biose route (P67).

Built from
Genes & organisms behind this score
GH33 sialidases
Sialic-acid catabolism
LOWP73HIGH

Bifidobacteria ferment milk sugars into acetate, gently acidifying the gut.

The dominant infant short-chain fatty acid, and a signal linked in research to a settled immune environment.

Built from
Genes & organisms behind this score
Bifid shunt (xfp)
Acetate pathway
LOWP8HIGH

The fibre-fermenting, butyrate-making machinery of later childhood.

Low, and this is expected: fibre-fermenting, butyrate-making organisms arrive around weaning, so this is a normal developmental stage.

Built from
Genes & organisms behind this score
but / buk genes
Fibre-fermenting taxa (arrive later)
LOWP57HIGH

The toddler headline. The fibre-and-butyrate machinery, near-absent in infancy, is now established and on track.

Driven by Faecalibacterium, Agathobacter and Roseburia. Solid, with room to grow toward its full later-childhood level.

Built from
Genes & organisms behind this score
but / buk genes
F. prausnitzii
Agathobacter
Roseburia
LOWP48HIGH

The variety of carbohydrate-active enzymes (CAZymes) your child's community carries, the range of plant fibres it can digest.

Good for age and broad enough to support a healthy fermentation economy, with a little room to widen as the diet varies. This is the one gentle, actionable finding.

Built from
Genes & organisms behind this score
Glycoside-hydrolase families
Polysaccharide-lyase families
Bacteroides, Roseburia, Bifido
LOWP53HIGH

The capacity to ferment resistant starch, the starch in cooked-and-cooled potato, rice, legumes and whole grains.

Anchored by the keystone degrader Ruminococcus bromii, which is present. A maturing part of the toddler fibre economy.

Built from
Genes & organisms behind this score
R. bromii amylosome
Pullulanase CAZymes
Amylase CAZymes
LOWP61HIGH

The most abundant gut short-chain fatty acid, made by many organisms including Bifidobacteria and acetogens such as Blautia.

A steady, well-supplied base of the fermentation economy, typical for age.

Built from
Genes & organisms behind this score
Acetogen pathway (Wood-Ljungdahl)
Bifid shunt
LOWP58HIGH

Lactate left by other microbes is converted onward to butyrate and propionate by cross-feeders.

A healthy, stable food chain, carried by Anaerobutyricum hallii, Anaerostipes and Veillonella.

Built from
Genes & organisms behind this score
A. hallii lactate→butyrate
Anaerostipes lactate→butyrate
Veillonella lactate→propionate
LOWP74HIGH

The total breadth of carbohydrate-active enzymes across your child's community: how many different fibre types the microbes can, between them, attack.

Broad and strong, the hallmark of a mature, plant-fed gut. Breadth is what keeps a gut producing beneficial short-chain fatty acids whatever is on the plate that week.

Built from
Genes & organisms behind this score
GH/PL/CE CAZyme family count
Bacteroides
Ruminococcus
Roseburia
Bifidobacterium
LOWP70HIGH

The starch that survives cooking and reaches the colon, in cooled potato, rice, legumes and wholegrains.

A strong resistant-starch engine led by the keystone primary degrader R. bromii, which cracks starch granules open for the whole community.

Built from
Genes & organisms behind this score
GH13 amylases
Starch-utilization system (Sus)
R. bromii
B. adolescentis
LOWP66HIGH

The main fibre in wheat, rye and other wholegrains.

A well-equipped arabinoxylan-degrading capacity, driven by Roseburia and Bacteroides: a marker of wholegrain-rich eating.

Built from
Genes & organisms behind this score
GH10/GH11 xylanases
GH43 arabinofuranosidases
R. intestinalis
B. ovatus
LOWP72HIGH

The premier short-chain fatty acid, the preferred fuel of the cells lining the colon.

A strong, well-established butyrate engine, drawing on the full fibre-fermenting core.

Built from
Genes & organisms behind this score
but / buk genes
Butyryl-CoA:acetate CoA-transferase
F. prausnitzii
Agathobacter
Roseburia
LOWP67HIGH

Lactate is an intermediate that a healthy community consumes and recycles onwards.

A healthy set of lactate-users that recycle it into butyrate and propionate, a sign of a stable, mature food chain.

Built from
Genes & organisms behind this score
Lactate → butyrate (A. hallii)
Anaerostipes
Lactate → propionate (Veillonella)
LOWP33HIGH

The variety of carbohydrate-active enzymes, the community's fibre toolkit and the flagship school-age function. These are genetic capacities: what the community is equipped to do.

A little narrow for age, consistent with a smaller range of plant fibres reaching the gut. It is one of the most diet-responsive things we measure, and widens quickly as the range of plant fibres grows.

Built from
Genes & organisms behind this score
GH / PL / CE gene-family diversity
Fibre-fermenting taxa
LOWP28HIGH

The colon's preferred fuel and the short-chain fatty acid most tied to gut-barrier and immune tone.

Low for age, the clearest lever in your child's profile and downstream of the lower-fibre pattern. Raising it is about widening the fibres that reach the colon.

Built from
Genes & organisms behind this score
but / buk genes
F. prausnitzii
Roseburia
Agathobacter
LOWP71HIGH

How much the community leans on the gut's mucus layer as a food source rather than on dietary fibre. A gut always has a healthy mucus layer, and some mucus-turnover is normal and useful.

Slightly elevated, the expected companion of a lower-fibre diet. It typically eases on its own as the variety of plant fibres in the diet increases.

Built from
Genes & organisms behind this score
Mucin-degrading gene share
Akkermansia
M. gnavus
Inverse fibre capacity
LOWP61HIGH

Whether the community is fermenting mostly carbohydrates (saccharolytic, the favoured pattern) or leaning toward protein fermentation.

A slight proteolytic tilt, the natural flip-side of a lower-fibre diet. It moves back toward the saccharolytic side as fibre variety increases.

Built from
Genes & organisms behind this score
Proteolytic taxa share
Alistipes
Bilophila
Inverse fibre capacity
LOWP44HIGH

The specialist genes (7α-dehydroxylation) that convert primary to secondary bile acids, a later-childhood milestone.

Present and maturing in your child's profile, a healthy maturation signal. Secondary bile acids also help hold opportunists in check.

Built from
Genes & organisms behind this score
baiCD genes
Clostridium scindens
C. hylemonae
LOWP42HIGH

The single most actionable readout in an adolescent report. It compares fibre-fermenting (saccharolytic) capacity with protein-fermenting (proteolytic) capacity, the balance that most shapes the day-to-day gut environment of a growing, active teenager.

Your child's community is capable on both sides, and the balance currently leans protein: an expected pattern on a higher-protein athletic diet, and a very fixable one. Keep the protein your child's training needs, and pair every protein-rich meal with generous fibre.

Built from
Genes & organisms behind this score
Saccharolytic capacity
Proteolytic capacity
LOWP74HIGH

The gut lining's preferred fuel and the short-chain fatty acid most linked in research to a healthy, settled colon.

Strong for age, driven by an abundant fibre-fermenting guild: a dependable engine for gut-lining energy.

Built from
Genes & organisms behind this score
but / buk genes
F. prausnitzii
Roseburia
Anaerostipes
Agathobacter
LOWP69HIGH

The range of carbohydrate-active enzymes the community carries, the toolkit for breaking down the many different plant fibres in a varied diet.

A broad toolkit, good for age, and the raw material the SCFA engine needs. Resistant-starch fermentation is good too (P64).

Built from
Genes & organisms behind this score
CAZyme families
Bacteroides / Roseburia / Ruminococcus glycan enzymes
Ruminococcus bromii
LOWP72HIGH

The capacity to ferment protein that reaches the colon, with branched-chain fatty acids (P66) as its by-products.

A little elevated and consistent with a higher-protein, athletic diet: some protein is being fermented in the colon rather than fully absorbed upstream. This is context, read as a balance signal.

Built from
Genes & organisms behind this score
Proteolytic taxa
Amino-acid fermentation genes
Branched-chain amino-acid fermentation
LOWP57HIGH

The capacity to produce methane by consuming hydrogen from fermentation, carried by the archaeon M. smithii.

Present and typical for an adolescent. Methane can influence gas and stool patterns, which is why we report it, and it is neither good nor bad.

Built from
Genes & organisms behind this score
M. smithii
Methanogenesis (mcr) genes
Key microbes

The organisms that matter at this stage

The keystones shift as your child grows: from the milk loving Bifidobacteria of infancy to the fibre fermenting, butyrate making community of later childhood. Each stage gets its own highlights.

Sample illustration from the report
Bifidobacterium longum subsp. infantisFavourable
LOWP74HIGH
18.4 %P74 · Strongmed 9.0 %
The complete digester of breast-milk sugars and the keystone of a healthy infant gut. Present and abundant, excellent.
HMO-utilization capacityFavourable
LOWP78HIGH
P78High for age
The genomic capacity to digest breast-milk sugars: high, driven by B. infantis.
Bifidobacterium (breve / bifidum)Favourable
LOWP60HIGH
14.2 %P60 · Typical for agemed 12.0 %
Milk-sugar cross-feeders that, with B. infantis, anchor your baby's milk-oriented community.
Bacteroides (fragilis / dorei)Context
LOWP44HIGH
4.1 %P44 · Typical for agemed 4.9 %
Early anaerobes that help train the immune system. Establishing normally.
Butyrate capacityContext
LOWP8HIGH
P8Very low, normal now
The fibre-fermenting, butyrate-making machinery: low now, which is exactly right before weaning.
Bifidobacterium dominanceDevelopmental
LOWP71HIGH
61 %P71 · Strong for agemed 52 %
High single-genus dominance is the signature of a healthy milk-fed gut.
Faecalibacterium prausnitziiFavourable
LOWP56HIGH
7.4 %P56 · Established for agemed 6.6 %
The flagship butyrate producer of childhood, which rises strongly after weaning. The anchor of your child's new fibre-fermenting community.
Agathobacter rectalisFavourable
LOWP54HIGH
5.1 %P54 · Established for agemed 4.7 %
A major fibre-fermenting butyrate producer that arrives with solid food. Well established, a sign the butyrate network has matured on schedule.
Ruminococcus bromiiFavourable
LOWP52HIGH
2.2 %P52 · Present for agemed 2.0 %
The resistant-starch keystone. It cracks open cooked-and-cooled starch granules and releases food for the whole community.
Anaerobutyricum halliiFavourable
LOWP50HIGH
1.9 %P50 · Typical for agemed 1.9 %
The lactate to butyrate cross-feeder that bridges infancy and childhood, converting the lactate left by other microbes into butyrate.
Bacteroides / Phocaeicola balanceContext
LOWP49HIGH
P49Balanced for age
The glycan-generalist anaerobes that digest a broad range of plant and mucin sugars. A balanced presence supports fibre breadth and colonization resistance.
Bifidobacterium dominanceDevelopmental
LOWP46HIGH
14 %P46 · Declining, expectedmed 16 %
By toddlerhood the milk-fed signature declines as the community diversifies, a developmental step. Your child's decline is right on track.
Faecalibacterium prausnitzii (complex)Favourable
LOWP70HIGH
9.8 %P70 · Strong for agemed 8.0 %
The flagship butyrate producer and one of the most abundant organisms in a healthy child's gut. Well established for age, an anchor of the fibre-fermenting core.
Agathobacter rectalisFavourable
LOWP64HIGH
6.1 %P64 · Typical for agemed 5.4 %
A major butyrate producer that ferments dietary fibre and starch. Rises strongly after weaning and is well represented here.
Ruminococcus bromiiFavourable
LOWP66HIGH
3.4 %P66 · Strong for agemed 2.6 %
The keystone resistant-starch degrader: it opens up starch granules that other microbes then feed on. Its healthy presence is a signature of a fibre-fed gut.
Roseburia intestinalisFavourable
LOWP61HIGH
2.9 %P61 · Typical for agemed 2.4 %
A motile butyrate producer specialising in arabinoxylan, the main fibre in wholegrains. Present at a healthy level.
Bacteroides thetaiotaomicronContext
LOWP57HIGH
4.2 %P57 · Typical for agemed 4.0 %
A glycan generalist with a huge repertoire of fibre-degrading enzymes. A versatile community backbone.
Akkermansia muciniphilaDevelopmental
LOWP54HIGH
1.6 %P54 · Typical for agemed 1.4 %
The mucin specialist that lives at the gut lining. It appears and rises through childhood, and is present here at a healthy, balanced level.
Faecalibacterium prausnitziiFavourable
LOWP27HIGH
3.1 %P27 · Low for agemed 6.5 %
The flagship butyrate producer and one of the most abundant organisms in a healthy older child. Present but low for age, and the one most responsive to more varied plant fibre.
Roseburia / AgathobacterFavourable
LOWP30HIGH
1.6 %P30 · Low for agemed 3.4 %
Fibre-fermenting butyrate producers that thrive on whole grains and vegetables. They respond directly to broadening dietary fibre.
Ruminococcus bromiiFavourable
LOWP31HIGH
0.9 %P31 · Low for agemed 2.2 %
The keystone resistant-starch degrader, the organism that cracks open starch granules so others can feed.
Akkermansia muciniphilaContext
LOWP71HIGH
2.4 %P71 · Slightly highmed 1.3 %
A mucus-associated organism, favourable in balance, that leans on the gut's mucus layer when dietary fibre is scarce. Slightly elevated here, the mucin-reliance signal of a lower-fibre pattern.
Bacteroides / Segatella balanceContext
LOWP38HIGH
P38Bacteroides-leaning
The enterotype tilt of the community, read as context: Bacteroides-dominant with low Segatella copri, the pattern associated with a lower-fibre, more Western diet.
Faecalibacterium prausnitzii complexFavourable
LOWP71HIGH
9.8 %P71 · Strong for agemed 7.5 %
The keystone butyrate producer and one of the most reassuring organisms in a mature gut. Supports the gut lining and a settled immune environment.
Roseburia / Anaerostipes (butyrate guild)Favourable
LOWP66HIGH
6.4 %P66 · Typical for agemed 5.6 %
Fibre-fermenting and lactate-using butyrate producers that, with Faecalibacterium, anchor the SCFA engine. Well established.
Bacteroides / Phocaeicola generalistsContext
LOWP58HIGH
18.2 %P58 · Typical for agemed 17.0 %
Broad glycan degraders that digest a wide range of plant fibres and form a stable backbone of the adult-type community. A normal, prominent feature.
Akkermansia muciniphilaContext
LOWP54HIGH
1.6 %P54 · Typical for agemed 1.4 %
A mucus-layer specialist that appears in childhood and is a normal part of a mature community. Present at a healthy, moderate level.
Bifidobacterium adolescentisDevelopmental
LOWP62HIGH
3.1 %P62 · Typical for agemed 2.6 %
The adult-type Bifidobacterium and a genuine maturation marker: low in infancy, it rises after weaning and is well established by adolescence. Ferments starch and fructans.
Bilophila wadsworthiaContext
LOWP70HIGH
0.9 %P70 · Higher end, diet-linkedmed 0.6 %
A sulfur-producing organism that rises with an animal-protein and fat diet. At the higher end here, a diet-linked protein marker, context only.

Alongside these, the report lists every age appropriate organism of the profile, grouped by role, each with abundance, percentile against the age matched reference and an interpretation.

In detail

What we screen alongside the developmental picture

We also check the sample for clinically relevant organisms, for a fungal panel with three yeasts and for antibiotic resistance genes, all from the same stool sample and all reported for the age of your child.

Clinically relevant bacteria and parasites are screened from the same sequencing run as the developmental picture. Reporting follows the age of your child.

What is screenedDetection only
Clinically relevant bacteriaParasite DNAClostridioides difficileToxin genes

Each finding appears as detected or not detected, with a short line on how to read it at this age.

Adjusted for ageFrom 2 years
Under 2 years: C. difficile stays outFrom 2 years: reported

Carriage of C. difficile is very common and expected in healthy babies, so the report starts reporting it once it carries meaning, from around two years.

How it appearsExample
ScreeningNo further findings flagged

In the example reports of all five stages no clinically relevant bacterial or parasitic DNA was flagged.

Yeasts live in many healthy children’s guts. We report three of them as presence, each with how often they appear in healthy children of the same age.

Yeasts in the panel3 entries
Candida albicansSaccharomyces cerevisiaeCandida (non-albicans)

Read from the same DNA as the bacteria, without a separate sample or an extra charge.

In the healthy referencePrevalence
Infants: C. albicans in about 60 %School age: about 30 %

Every result is placed against how often the yeast is detected in healthy children of that stage, so presence alone is read in context.

How it appearsExample
DetectionCandida albicansDetected

Saccharomyces cerevisiae is diet and environment associated and is a normal finding once children eat a varied diet.

Antibiotic resistance genes are a natural part of every child’s gut, carried by ordinary gut bacteria and seeded from family, food and environment. We report the level for the age of your child.

Read as a level

The report describes the resistance gene load of the community as a level for age, rather than as a list of individual genes.

Seeded early

Resistance genes are present in every baby’s gut from birth, passed on from mother and environment.

Age matched

The comparison group is healthy children of the same developmental stage, so a normal level stays visible as normal.

Part of the standard report

The resistance gene level is included in every Microbiome 360° Gut Kids report, in every age stage.

When this information can help
  • After a course of antibiotics, to see how the community recovers.
  • When several courses followed each other within a short time.
  • After a hospital stay or a longer trip.
  • When you want a baseline before a planned procedure.

The report explains what the level means at this age, so you can discuss the result with your paediatrician.

Included in your test kit

Everything you need to collect the sample at home

The kit arrives as a box with everything you need to collect the sample at home, for babies also straight from the nappy. Afterwards, the tube goes back into the same box and you send it to the laboratory using the prepaid return label. Nothing to buy, nothing to pack and no appointment needed.

bactera.Microbiome 360°Gut Kids
Render: box with kit contentsRender: box with kit contents
What is in the box
  • 1
    Collection tube with stabilising solutionKeeps the DNA of the stool sample stable in the post, without refrigeration.
  • 2
    Collection aid (Stool Catcher)For older children over the toilet. For babies and toddlers the sample can be taken straight from the nappy.
  • 3
    Illustrated step-by-step instructionsWritten for collection from children and babies, plus the notes on preparation.
  • 4
    Card with your registration code (Sample ID Card)Links the kit online with your Bactera account, where you also state the feeding stage for babies.
  • 5
    Hygiene bag (protective bubble wrap)Sealable and padded, for safe transport of the tube.
  • 6
    Prepaid return label on the boxThe same box goes back to the laboratory. Seal it, apply the label, drop it off. Return shipping is included in the price.
The method

Why shotgun shows more than a 16S test

Most gut tests for children read a single marker gene or culture only what will grow in the lab. We read the entire DNA of the stool sample and compare it with healthy children of the same age.

 Culture methodCulture (other providers) 16S sequencing16S (other providers) Shotgun metagenomicsShotgun (Bactera)
What is read Some bacteria and fungi A single marker gene The entire DNA of the sample
Resolution A few bacteria Mostly genus level Species level
Bifidobacterium species separated Partly Unreliable ✓Yes, including B. longum subsp. infantis
Age matched reference No Rarely ✓Yes, five age stages from 0 to 17 years
Fungi Partly No ✓Yes, three yeasts of the fungal panel
Functional genes No No ✓Yes, milk sugar, fibre, butyrate and more
Antibiotic resistance Limited No ✓Yes, reported as a level for age
Sequencing depth per sample
Bactera shotgun metagenomics10 millionPaired-end reads per sample. The DNA of all organisms in the stool sample is read. If required, we increase the sequencing depth to 25 million reads: contact us before ordering via our contact page or info@bactera.de.
around 1000 times
Typical 16S testapprox. 10,000Reads per sample, limited to a single marker gene, usually with resolution down to genus level.

The comparison covers only the sequencing depth per sample, i.e. the number of reads analysed. It refers to the analysis method and not to individual providers. More sequencing depth means more DNA analysed per sample.

Market position

Among the leading gut analyses for children in Europe

Most gut tests for children in Germany use 16S sequencing or culture methods, and they compare a child with adult reference values. We sequence the entire DNA of the stool sample and compare it with healthy children of the same developmental stage. Here is what that means in numbers.

10 millionPaired-end reads per stool sample

Sequencing depth at the level of international microbiome research, instead of the roughly 10,000 reads of a typical 16S test. If required, we increase the sequencing depth to 25 million reads: contact us before ordering via our contact page or info@bactera.de.

5Age stages with their own references

Infant, toddler, preschool, school age and adolescent, each with its own reference values, its own key microbes and its own report sections.

10 to 15Analyses per age stage

From microbiome maturity and ecosystem balance through the functional panels to the screening and the personalised action plan.

01Developmental, not adult scaled

A five month old and a nine year old are read against their own age group. Low diversity with strong Bifidobacterium dominance is the healthy pattern in a baby and a finding worth looking at in a school child.

02Species level instead of genus level

A 16S test usually stops at the genus. We identify the species, which is what separates B. longum subsp. infantis, the specialist milk sugar digester, from its relatives.

03Technologically among the leaders

Shotgun metagenomics at species level is the standard that international microbiome research works to. In consumer analytics it is one of the few methods used worldwide.

04Functional genes in the report

Milk sugar digestion, fibre fermentation, butyrate, bile acids and the other capacities are read from the genes themselves, together with the organisms behind each value.

05Analysis in our own pipelines

The bioinformatics runs in our own analysis pipelines in Cologne, at the highest scientific level. We do not buy in finished reports.

06One sample, a growing picture

The stored sample can be reanalysed as your child grows and as the science advances, and the raw data stays available for download at any time.

This positioning refers to the analysis method used in each case and to publicly available information from providers of gut tests for children in the German-speaking market, as of 2026.

How it works

Four steps to your report

1
Choose the age stage and order

Choose the age stage and order

You select the age stage at checkout. With you in 1 to 3 working days. Register the kit online at www.my.bactera.de with the code from the box.

2
Collect the sample at home

Collect the sample at home

A small stool sample with the tube from the kit. The illustrated instructions are written for children and babies, including collection from the nappy.

3
Send it back prepaid

Send it back prepaid

The same box goes back to the laboratory with prepaid postage. The analysis is carried out by Bactera in Germany with our own bioinformatic analysis pipelines at the highest scientific standard.

4
Your report after 4 to 6 weeks

Your report after 4 to 6 weeks

In your Bactera account at www.my.bactera.de, with explanations, interpretation and raw data to download.

Frequently asked questions

Frequently asked questions about the kids gut analysis

From what age is the analysis possible?

From birth to 17 years. The five age stages are infant from 0 to 12 months, toddler from 1 to 3 years, preschool from 4 to 5 years, school age from 6 to 12 years and adolescent from 13 to 17 years. From 18 onwards the adult gut analysis is the right choice.

Why are separate age stages needed?

Because the same result means something entirely different depending on age. Low diversity with strong Bifidobacterium dominance is the expected pattern in a baby, while in a school child it would stand out. The whole report is therefore read against the reference values, the measures and the reporting rules of the chosen stage.

What if my child sits between two stages?

Choose the stage matching the actual age at the time of sampling. For children close to a stage change the analysis takes the transition range into account. If you are unsure, write to us before ordering.

How do I take a sample from a baby or toddler?

With the tube from the test kit, at home, in a few minutes. The illustrated instructions also cover collection from a nappy. Older children use the collection aid over the toilet. It works without an appointment and without a practice visit.

What do I state for breastfed or formula fed babies?

For babies you state the feeding stage during registration: breastfeeding, formula, mixed or already on solids. The infant report refers to it: milk adaptation, Bifidobacterium ecology and HMO utilisation are read using age and the stated feeding context.

What does microbiome maturity mean?

It describes how closely the community matches the degree of development expected at that age, reported as a range rather than a precise clock. It is a developmental descriptor of the microbial community, alongside diversity, ecosystem balance and the functional panels.

Is the analysis useful after a course of antibiotics?

Yes, it describes the current state, for example reduced bifidobacteria, changed diversity or a higher resistance gene level for age. If you want to see the usual state, wait about four weeks after the antibiotics. To follow a trajectory, two measurements are recommended.

When is the best time to collect the sample?

When your child is eating as usual and is well. Keep the diet unchanged in the days before, wait until an acute stomach bug has passed and allow about four weeks after a course of antibiotics. Ideally stop probiotics seven days beforehand.

Which reference group is my child compared with?

Healthy children of the same developmental stage. Every percentile, every median and every band on this page comes from that age matched reference group, which is why the same value can read as strong at one stage and as emerging at another.

How long does the analysis take?

Usually 4 to 6 weeks after the sample arrives at the laboratory. Shotgun metagenomics generates far more data than a 16S test, and this data is then analysed in our own pipelines against the references of the chosen age stage. You are notified by email as soon as the report is ready.

What does the test cost and does health insurance pay for it?

The test costs a one-off €229,00 including shipping and prepaid return within Germany, the same for every age stage. It is a self-pay service. Statutory health insurers generally do not cover microbiome analyses. Whether a private insurer contributes depends on the policy.

What does the lifetime DNA bank mean and what happens to the data?

The sample is analysed in Germany and processed pseudonymously. The extracted DNA stays stored, so the sample can be reanalysed as your child grows and as the science advances, without a new sample. You can download the full organism list, the FASTQ files and the raw abundances at any time.